#!/bin/bash
sed '/setup_case()/d' setup_case.py > temp_file

sed 's/def calceps/def calceps_standard/' ../pyCALC-RANS.py | \
sed 's/def fix_eps/def fix_eps_standard/' > temp_file1

# assemble with explicit newlines between each file
{
    cat ../global
    echo ""
    cat temp_file
    echo ""
    cat modify_case.py
    echo ""
    cat calceps_NN_SR.py
    echo ""
    cat temp_file1
} > exec-pyCALC-RANS.py

/bin/python -u exec-pyCALC-RANS.py > out